Source: fastqtl
Standards-Version: 4.7.4
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:
 Dylan Aïssi <daissi@debian.org>,
 Étienne Mollier <emollier@debian.org>,
Section: science
Build-Depends:
 debhelper-compat (= 14),
 dh-sequence-python3,
 libblas-dev,
 libboost-dev,
 libboost-iostreams-dev,
 libboost-program-options-dev,
 libbz2-dev,
 libeigen3-dev,
 libgsl-dev,
 libhts-dev,
 python3,
 r-mathlib,
 zlib1g-dev,
Vcs-Browser: https://salsa.debian.org/med-team/fastqtl
Vcs-Git: https://salsa.debian.org/med-team/fastqtl.git
Homepage: http://fastqtl.sourceforge.net/

Package: fastqtl
Architecture: any
Depends:
 python3,
 r-mathlib,
 ${misc:Depends},
 ${python3:Depends},
 ${shlibs:Depends},
Recommends:
 r-bioc-qvalue,
 r-cran-argparser,
Suggests:
 fastqtl-doc,
Description: Quantitative Trait Loci (QTL) mapper in cis for molecular phenotypes
 The goal of FastQTL is to identify single-nucleotide polymorphisms (SNPs)
 which are significantly associated with various molecular phenotypes
 (i.e. expression of known genes, cytosine methylation levels, etc).
 It performs scans for all possible phenotype-variant pairs in cis
 (i.e. variants located within a specific window around a phenotype).
 FastQTL implements a new permutation scheme (Beta approximation) to accurately
 and rapidly correct for multiple-testing at both the genotype and phenotype
 levels.

Package: fastqtl-doc
Architecture: all
Multi-Arch: foreign
Section: doc
Depends:
 ${misc:Depends},
Enhances:
 fastqtl,
Description: QTL mapper in cis for molecular phenotypes - documentation
 The goal of FastQTL is to identify single-nucleotide polymorphisms (SNPs)
 which are significantly associated with various molecular phenotypes
 (i.e. expression of known genes, cytosine methylation levels, etc).
 It performs scans for all possible phenotype-variant pairs in cis
 (i.e. variants located within a specific window around a phenotype).
 FastQTL implements a new permutation scheme (Beta approximation) to accurately
 and rapidly correct for multiple-testing at both the genotype and phenotype
 levels.
 .
 This package provides documentation and example data to work with FastQTL.
